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Identification of genes associated with drought tolerance in barley

Research Abstract
Mapping of quantitative trait genes (QTGs) associated with drought related traits is essential for improving drought tolerance in crop species. In silico identification of candidate genes relies on annotation of critical QTGs to a variety of web resource-based datasets. The barley reference sequence was employed to map QTGs significantly associated with the proline accumulation and osmotic potential. Annotation of the critical QTGs contigs to the NCBI protein database identified 72 gene orthologs located on chromosomes 1H, 2H, and 7H, from which seven genes were identified as candidates. Expression analysis of all seven candidate genes revealed differential expression pattern between plants grown under well-watered conditions and drought-stress. The results represent a successful and highly powerful implementation of genome-wide scanning approach based on in silico mapping of QTGs to identify gene clusters having a common transcript pattern with similar function.
Research Authors
S. F. Abou-Elwafa
Research Department
Research Journal
Biologia Plantarum
Research Pages
pp. 1-8
Research Publisher
Springer
Research Rank
1
Research Vol
Vol. 60
Research Website
https://link.springer.com/article/10.1007/s10535-017-0765-0
Research Year
2017

Genetic identification and expression profiling of drought responsive genes in sorghum

Research Abstract
Drought is the most important yield limiting abiotic stress worldwide and could have negative effects on food security. This study was conducted to map yield and yield-contributing trait QTLs under drought stress by association mapping, and to in silico identify drought responsive genes and assay their expression profile. Association analysis was conducted using 181 SSR markers and nine phenotypic traits collected from a structured sorghum population consisting of 96 accessions evaluated under optimum and drought stressed conditions at Assiut University Experimental Farm, Assiut, Egypt. Genomic regions associated with major drought tolerance QTLs were annotated with NCBI and sorghum databases to identify drought responsive genes, which were further transcriptionally analyzed. Significant differences between optimum irrigation and drought-stressed conditions were observed in all measured phenotypic traits. Association analysis revealed 93 marker-trait associations between 71 SSR markers and the nine phenotypic traits with an R2 value ranging from 6.56 to 42.64%. A high degree of linkage disequilibrium (>52%) was identified among markers on different chromosomes, suggesting epistatic interaction. BLASTP annotation of QTL genomic sequences identified 86 gene homologs, from which fifteen genes are drought responsive. All fifteen genes were differentially expressed in drought tolerant and susceptible accessions and their expression levels were highly induced in response to drought stress. The results provide a powerful approach coupling association and in silico analyses to identify gene clusters having a common expression profile with similar function, pointing to an evolutionary mechanism to initiate a quantitative drought stress tolerance mechanism.
Research Authors
Salah Fatouh Abou-Elwafaa and Tariq Shehzad
Research Department
Research Journal
Environmental and Experimental Botany
Research Pages
pp. 12-20
Research Publisher
ELSEVIER
Research Rank
1
Research Vol
Vol. 155
Research Website
https://www.sciencedirect.com/science/article/pii/S0098847218306543
Research Year
2018

Effect of Some Simulative Substances on Growth and Productivity of Egyptian Cotton Under Late Plantings In Upper Egypt

Research Abstract
Field experiment was conducted at Shandweel Agricultural Station, Sohag Governorate in Upper Egypt during 2015 and 2016 seasons to study the effect of using some simulative substances on growth and productivity of Egyptian cotton cultivar (Giza 90) under late plantings in Upper Egypt. The experimental design was a randomized complete block designee using split plot arrangement with four replications. The Main plots included two planting dates (early in 1st March and late in 1st April) and sub plots included simulative substances (mineral, organic and biotic ) application namely: Silicate 7.5 cm3/L, Lithovit (CO2) 5g/L, Humic acid 5cm3/L, Mix of organic acids (citric 500 ppm, ascorbic 300 ppm and salicylic 200 ppm), Potassiomage 1kg/fed. and Mycorrhizae 4cm3/L with control (untreated plants). The combined analysis between years was done. Obtained results revealed that: Years affected significantly all characters under this study due to the variation in total amount of heat units, which was higher in 2016 growing season than 2015 season, this led to significant increase in vegetative growth (plant height and no. of fruiting branches/plant) as well as its caused decrease in most studded traits. Early planting significantly increased no. of fruiting branches/plant, no. of open bolls /plant, boll weight, seed index, seed cotton yield/fed. and fiber quality compared with the late planting date. Simulative substances application affected significantly plant height, number of fruiting branches /plant, number of open bolls /plant, boll weight, seed index, seed cotton yield /fed. and fiber quality. Plants sprayed with Humic acid gave the highest averages of these traits followed by plants sprayed with Silicate then plants sprayed with Lithovit. The interactions between years × planting dates and years × simulative substances had a significant effect on growth, yield and fiber quality under this study. Moreover, the interaction between planting date × simulative substances had significant effect on growth, yield and fiber quality. Also, the interaction between years × planting dates × simulative substances had significant effect on growth, yield and fiber quality. Simulative substances (mineral, organic and biotic) application to plants under early and late planting date had positive effects on improving the performance of cotton plants, which increased plant growth and yield especially under late planting.
Research Authors
Abeer A. Farag; E.M.M. Shalaby , M.T. Said and S.A.F. Hamoda
Research Department
Research Journal
Egypt. J. of Appl. Sci.
Research Pages
412-427
Research Publisher
NULL
Research Rank
2
Research Vol
32 (12B)
Research Website
https://www.egas.zu.ed.eg/
Research Year
2017

Effect of Some Simulative Substances on Growth and Productivity of Egyptian Cotton Under Late Plantings In Upper Egypt

Research Abstract
Field experiment was conducted at Shandweel Agricultural Station, Sohag Governorate in Upper Egypt during 2015 and 2016 seasons to study the effect of using some simulative substances on growth and productivity of Egyptian cotton cultivar (Giza 90) under late plantings in Upper Egypt. The experimental design was a randomized complete block designee using split plot arrangement with four replications. The Main plots included two planting dates (early in 1st March and late in 1st April) and sub plots included simulative substances (mineral, organic and biotic ) application namely: Silicate 7.5 cm3/L, Lithovit (CO2) 5g/L, Humic acid 5cm3/L, Mix of organic acids (citric 500 ppm, ascorbic 300 ppm and salicylic 200 ppm), Potassiomage 1kg/fed. and Mycorrhizae 4cm3/L with control (untreated plants). The combined analysis between years was done. Obtained results revealed that: Years affected significantly all characters under this study due to the variation in total amount of heat units, which was higher in 2016 growing season than 2015 season, this led to significant increase in vegetative growth (plant height and no. of fruiting branches/plant) as well as its caused decrease in most studded traits. Early planting significantly increased no. of fruiting branches/plant, no. of open bolls /plant, boll weight, seed index, seed cotton yield/fed. and fiber quality compared with the late planting date. Simulative substances application affected significantly plant height, number of fruiting branches /plant, number of open bolls /plant, boll weight, seed index, seed cotton yield /fed. and fiber quality. Plants sprayed with Humic acid gave the highest averages of these traits followed by plants sprayed with Silicate then plants sprayed with Lithovit. The interactions between years × planting dates and years × simulative substances had a significant effect on growth, yield and fiber quality under this study. Moreover, the interaction between planting date × simulative substances had significant effect on growth, yield and fiber quality. Also, the interaction between years × planting dates × simulative substances had significant effect on growth, yield and fiber quality. Simulative substances (mineral, organic and biotic) application to plants under early and late planting date had positive effects on improving the performance of cotton plants, which increased plant growth and yield especially under late planting.
Research Authors
Abeer A. Farag; E.M.M. Shalaby , M.T. Said and S.A.F. Hamoda
Research Department
Research Journal
Egypt. J. of Appl. Sci.
Research Member
El-Sayed Mahmoud Mohamed Shalaby
Research Pages
412-427
Research Publisher
NULL
Research Rank
2
Research Vol
32 (12B)
Research Website
https://www.egas.zu.ed.eg/
Research Year
2017

Control of tomato seedling damping-off by seed treatments with some compounds

Research Abstract
Five fungal isolates were isolated from infected tomato seedlings showing damping-off which collected from several tomato nurseries of Assiut and New Valley Governorates, Egypt. These isolates were Rhizoctonia solani Kühn, Fusarium oxysporum f.sp. lycopersici Schlechtendahl, Fusarium semitectum Berk. & Rav., Setosphaeria rostrata Leonard and Alternaria alternata (Fries) Keisler. Also, tomato seed treatments with Humic acid, Algae (Kelpak), Silicon (Potassium silicate) and Fungicide Topsen M (positive control) significantly reduced the disease percentage and disease severity of damping-off on tomato seedlings compared with untreated infected plants. Topsen M treatment markedly and completely inhibited disease percentage of damping-off compared with other tested compounds. The most effective application of commercial compounds was find when tomato seeds were treat with Potassium silicate.
Research Authors
Omar H. H. Mahmoud, Mohamed A. E. Hassan, Mohamed H. A. Hassan, Fikry G. M. Fahmy
Research Department
Research Journal
The scientific conference of yang scientists, Assiut, Egypt 23 April 2018.
Research Pages
1-16
Research Publisher
Assiut University
Research Rank
4
Research Vol
NULL
Research Website
www.aun.edu.eg
Research Year
2018

Control of tomato seedling damping-off by seed treatments with some compounds

Research Abstract
Five fungal isolates were isolated from infected tomato seedlings showing damping-off which collected from several tomato nurseries of Assiut and New Valley Governorates, Egypt. These isolates were Rhizoctonia solani Kühn, Fusarium oxysporum f.sp. lycopersici Schlechtendahl, Fusarium semitectum Berk. & Rav., Setosphaeria rostrata Leonard and Alternaria alternata (Fries) Keisler. Also, tomato seed treatments with Humic acid, Algae (Kelpak), Silicon (Potassium silicate) and Fungicide Topsen M (positive control) significantly reduced the disease percentage and disease severity of damping-off on tomato seedlings compared with untreated infected plants. Topsen M treatment markedly and completely inhibited disease percentage of damping-off compared with other tested compounds. The most effective application of commercial compounds was find when tomato seeds were treat with Potassium silicate.
Research Authors
Omar H. H. Mahmoud, Mohamed A. E. Hassan, Mohamed H. A. Hassan, Fikry G. M. Fahmy
Research Department
Research Journal
The scientific conference of yang scientists, Assiut, Egypt 23 April 2018.
Research Pages
1-16
Research Publisher
Assiut University
Research Rank
4
Research Vol
NULL
Research Website
www.aun.edu.eg
Research Year
2018

Control of tomato seedling damping-off by seed treatments with some compounds

Research Abstract
Five fungal isolates were isolated from infected tomato seedlings showing damping-off which collected from several tomato nurseries of Assiut and New Valley Governorates, Egypt. These isolates were Rhizoctonia solani Kühn, Fusarium oxysporum f.sp. lycopersici Schlechtendahl, Fusarium semitectum Berk. & Rav., Setosphaeria rostrata Leonard and Alternaria alternata (Fries) Keisler. Also, tomato seed treatments with Humic acid, Algae (Kelpak), Silicon (Potassium silicate) and Fungicide Topsen M (positive control) significantly reduced the disease percentage and disease severity of damping-off on tomato seedlings compared with untreated infected plants. Topsen M treatment markedly and completely inhibited disease percentage of damping-off compared with other tested compounds. The most effective application of commercial compounds was find when tomato seeds were treat with Potassium silicate.
Research Authors
Omar H. H. Mahmoud, Mohamed A. E. Hassan, Mohamed H. A. Hassan, Fikry G. M. Fahmy
Research Department
Research Journal
The scientific conference of yang scientists, Assiut, Egypt 23 April 2018.
Research Member
Research Pages
1-16
Research Publisher
Assiut University
Research Rank
4
Research Vol
NULL
Research Website
www.aun.edu.eg
Research Year
2018

Improvement in phosphorus use efficiency of corn crop by amending the soil with
sulfur and farmyard manure

Research Abstract
The use of organic manure is proposed to reduce the use of chemical fertilizers, as well as to add sulfur (S) into the soil so that the phosphate use efficiency may be improved by maize crop. This field experiment was conducted during 2014 at Assiut city, Assiut governorate, Egypt to study the effect of sulfur and farmyard manure (FYM) on phosphorus availability, grain yield and phosphorus use efficiency of corn (Zea mays L. cv Single Hybrid 10). Randomized complete block design was followed with three replications. Four treatments viz SP= superphosphate, SP+S = superphosphate +sulfur, SP+FYM = superphosphate +farmyard manure and SP+FYM+S = superphosphate + farmyard manure + sulfur were tested. The soil analysis after corn harvest showed that the Olsen P of the soil improved with applying sulfur or farmyard manure and their mixture in presence of superphosphate. Adding farmyard manure with superphosphate enhanced grain yield of corn plants by 44.6% as well as the application of superphosphate with farmyard manure and sulfur increased the grain yield by 44.2% compared to the SP. The results in this study showed that amending soil by farmyard manure and sulfur with superphosphate improved phosphorus use efficiency in comparison with superphosphate alone.
Research Authors
Abu El-Eyuoon Abu Zied Amin
Research Department
Research Journal
Soil & Environment
Research Pages
62-67
Research Publisher
soil science society of Pakistan
Research Rank
1
Research Vol
37(1)
Research Website
NULL
Research Year
2018

Sustainable floor type for managing turkey production in a hot climate

Research Abstract
Floor type management is a significant factor in turkey production in hot climates exceeding 30°C. In the current investigation, a total of 360 turkeys aged 4 weeks were randomly distributed to investigate growth performance, carcass characteristics, health traits and airborne conditions. Birds of the 1st group were raised on the littered floor (control; C), whilst the 2nd (T1), 3rd (T2), 4th (T3), 5th (T4) and 6th (T5) groups were raised on cement, wire net, rubber mat, plastic and wooden slatted floors, respectively. Results indicated that, growth performance and meat quality were improved by increasing body weight, daily body weight gain, feed conversion ratio, tenderness and juiciness values with plastic and wooden slatted floors. Moreover, using plastic and wooden slatted floors attenuated body temperature, airborne dust particulates and ammonia concentrations. In conclusion, the placing of plastic, wooden slatted floors or wire net on floor reduced the incidence of health disorders and alleviated heat stress effects by decreasing body temperature and H/L ratio. Plastic and wooden slatted floors are highly recommended for managing turkey in a hot climate, due to the results obtained
Research Authors
Farghly M. F. A., Kh. M. Mahrose,Cooper, Ross; Ullah, Zafar; Rehman, Zaib; Ding, Chan
Research Department
Research Journal
Poultry Science
Research Member
Research Pages
1-7
Research Publisher
NULL
Research Rank
1
Research Vol
0
Research Website
NULL
Research Year
2018

Use of feed color and odor as attractive tools for managing turkey chicks at early feeding

Research Abstract
total number of 180 one-day old unsexed native turkey chicks were chosen for evaluating the response of turkeys to different feed odors and colors on growth performance, carcass characteristics, some meat quality and health traits. Birds were allocated in three main groups according to feed odor (non-odor, molasses and fish odors) and then each main group was divided to two sub-groups corresponded to non-colored and green colored feed, respectively. The findings indicated that birds fed diets of molasses or fish odors had significantly better values of body weight (BW), body weight gain (BWG), feed consumption (FC) and feed conversion ratio (FCR). Birds fed green color had heavier BW than those fed non color feed. BW, BWG and FC of birds fed green feed with molasses and fish odors significantly exceeded those of untreated feed at marketing age. No significant differences were found in each of some carcass traits, meat tender and juiciness due to feed odors, colors and their interactions. Liver percentage and meat flavor were increased in birds fed diets with molasses and fish odors than those of the non-odor group. Score of meat color was higher in birds fed green feed than those of the other group. Birds fed green feed with molasses or fish odor had the highest values of liver percentage, meat color and flavor scores. Plumage condition, H / L ratio and tonic immobility of turkeys fed green feed was significantly better than those of non-color group. No significant differences were found in plumage condition, body temperature, H / L ratio and tonic immobility due to feed odors. Considering the improved performance, it could be concluded that the native turkeys prefer green feed with molasses or fish odors over traditional one. Finally, the feeding on green colored feeds with molasses or fish odors for turkeys during growing period may be recommended.
Research Authors
Farghly M. F. A., O. H. El-Garhy and Enas A. M. Ahmad
Research Department
Research Journal
Egyptian J. Nutrition and Feeds
Research Member
Research Pages
289-299
Research Publisher
NULL
Research Rank
2
Research Vol
20(2)
Research Website
NULL
Research Year
2017
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