Skip to main content

The FT-IR Spectroscopic and Theoretical Studies of the Bentazon Molecule: A DFT Approach

Research Abstract

Abstract—Bentazon is a cyclosulfonamide herbicide widely used in agriculture, with increasing reports of its persistence and leaching into groundwater. Despite its environmental relevance, a comprehensive quantum chemical analysis of bentazon at an advanced DFT level remains unexplored. In this study, we apply the CAM-B3LYP/6-311++G(d, p) level of theory to investigate the optimized geometry, vibrational spectra, and electronic structure of bentazon. The calculated vibrational frequencies are scaled and compared with experimental FT-IR data; they are assigned by potential energy distribution (PED) analysis. Reactivity descriptors based on frontier molecular orbitals (HOMO–LUMO gap of 7.686 eV) reveal the molecule’s chemical stability and low polarizability, consistent with its environmental persistence. Importantly, electrostatic potential (ESP) surface analysis identifies distinct electrophilic and nucleophilic sites, offering new insights into its interaction potential with. This study represents the first comprehensive application of conceptual DFT, including natural bond orbital (NBO), atoms-in-molecules (AIM), reduced density gradient (RDG), electron localization function (ELF) analysis, and mulliken charge distribution of bentazon. These findings provide
a predictive framework for understanding bentazon’s environmental behavior, reactivity, and potential
for molecular recognition, offering valuable information for its regulation, detection, and remediation. This study provides a detailed quantum-level understanding of bentazon, which can contribute to modeling its environmental fate and designing safer agrochemical alternatives.
Keywords: bentazon, vibrational analysis, natural bond analysis, reactivity descriptors, molecular electrostatic potential

Research Authors
E. M. Ahmeda, * (ORCID: 0009-0006-3501-1844), M. A. Mottaleba (ORCID: 0009-0007-0680-8261), and R. M. Mahfouzb, ** (ORCID: 0009-0004-0293-4015)
Research Date
Research Department
Research Journal
Russian Journal of Physical Chemistry B
Research Pages
17
Research Publisher
Russian Journal of Physical Chemistry
Research Vol
Volume 20, pages 451–467 (2026)
Research Website
https://link.springer.com/article/10.1134/S1990793126700089
Research Year
2026

Synthesis and characterization of a novel phosphatidylinositol 5-phosphate (PI(5)P) photoaffinity probe

Research Abstract

Phosphatidylinositol 5-phosphate (PI(5)P) plays a crucial role in cellular signaling, cell proliferation, the DNA damage repair response, and gene transcription. However, the underlying mechanism of PI(5)P function in these cellular pathways is poorly understood. This lack of understanding results at least in part, from the dearth of available chemical tools to enable the investigation of PI(5)P interaction with target proteins in the corresponding biological systems. Here, we report the design and synthesis of a novel phosphatidylinositol 5-phosphate-based photoaffinity probe. The probe bound and photo-crosslinked to purified, recombinant hUHRF1 and TAF1 proteins that are known PI(5)P-interacting factors. Copper-catalyzed azide-alkyne cycloaddition (CuAAC) click chemistry with an azide-functionalized TAMRA dye allowed visualization of these proteins. We further show that the PI(5)P photoaffinity probe was functional in complex cell lysate by demonstrating protein crosslinking and fluorescent visualization with a TAMRA-azide. The data presented here validate the novel photoaffinity probe as a molecular tool for analyzing interactions and mapping the PI(5)P interactome.

Research Authors
Glen Brodie, Ahmed Sayed, Sarah Kreuz, Wolfgang Fischle and Stuart J. Conway
Research Date
Research Department
Research Journal
RSC Chemical Biology
Research Publisher
RSC
Research Website
DOI https://doi.org/10.1039/D6CB00148C
Research Year
2026

Enhanced adsorption of methylene blue (MB) dye by the MoS 2/ZIF-8 composite: isotherm and kinetics studies

Research Abstract

In this study, a zeolitic imidazolate framework (ZIF-8) loaded with molybdenum disulfide (MoS2) was prepared via a hydrothermal method. The as-prepared MoS2/ZIF-8 composite displayed a mesoporous structure with a BET surface area of 19.13 m2 g−1 and a mean pore diameter of 9.33 nm. The as-prepared ZIF-8 and MoS2/ZIF-8 composite were utilized as adsorbents for cationic dye from aqueous solution, and methylene blue (MB) dye was used as a pollutant model. The effects of pH, contact time, initial dye concentrations, adsorbent doses, and temperature on the adsorption efficiency were investigated. The adsorption study confirmed that the MoS2/ZIF-8 composite displayed higher adsorption capacity toward MB dye than that achieved with pristine ZIF-8. Moreover, the adsorption of MB dye onto ZIF-8 and the MoS2/ZIF-8 composite is an endothermic process. The adsorption kinetics confirmed that the …

Research Authors
Rofaida FH Darweesh, Remon M Zaki, Aldoshy Mahdy, Abdelaal SA Ahmed
Research Date
Research Department
Research Journal
Materials Advances
Research Member
Research Pages
338-350
Research Year
2025

Synthesis, Crystal Structure, Spectroscopic Characterization,and Computational Insights into a5,6,7,8-Tetrahydroisoquinoline Derivative withNaphthyl Substituent

Research Abstract

The chemical reaction of 7-acetyl-6-hydroxy-3-mercapto-1,6-dimethyl-8-phenyl-5,6,7,8-tetrahydroisoquinoline-4-carbonitrile withN-(naphthalene-1-yl)-2-chloroacetamide in ethanol in the presence ofanhydrous sodium acetate results in the synthesis of a5,6,7,8-tetrahydroisoquinoline derivative with name7-Acetyl-4-cyano-1,6-dimethyl-6-hydroxy-8-phenyl-3-[N-(naphthalen-1-yl)carbamoylmethylthio]-5,6,7,8-tetrahydroisoquinoline (ACCT). Thesynthesized compound is characterized by FT-IR, 1 H, and 13 C NMRspectroscopy. Furthermore, the crystal structure is verified by single crystalX-ray diffraction (XRD), which shows that the molecular configuration ofACCT is stabilized by N─H … N bonding. Infinite C(11) molecular chains areformed by O─H … O bonding that runs along the b-axis, and consecutivechains are further interlinked by C─H … O bonding. Hirshfeld surfaceanalysis reveals the role of intermolecular interaction in crystal packing, whereH … H and C—H … O interactions have notable percentage contributions.Dispersioninteractions provides the dominant stabilization forsupramolecular assembly, followed in significance by electrostaticinteractions. Electronic structure calculations and aromaticity analysis revealthe reactivity of the synthesized compound at the M062x/def2tzvp method.With the help of DFT simulations, the crucial role of van der Waals forces andcharge transfer in modifying optical and non-linear optical (NLO) propertieshas been underscored. Ab initio molecular dynamics study reveals thethermodynamic and kinetic behavior at room temperature.

Research Authors
Shaaban K. Mohamed, Atazaz Ahsin, Muhammad Ashfaq, Aziz B. Ibragimov,Etify A. Bakhite, Esraa Khamies, Awad I. Said, Hatem A. Abuelizz, Rashad Al-Salahi,and Youness El Bakri
Research Date
Research Department
Research Journal
CRYSTAL RESEARCH AND TECHNOLOGY
Research Pages
e70050
Research Publisher
Wiley. Online Library
Research Vol
60
Research Website
https://onlinelibrary.wiley.com/doi/epdf/10.1002/crat.70050
Research Year
2025

Design, synthesis, and antimicrobial evaluation of newly developed pyridine and pyrimidine derivatives derived from enaminones

Research Abstract

Enaminones have garnered significant attention because of their unique properties and their importance in synthetic chemistry as highly versatile building blocks. In this study, a novel series of heterocyclic compounds based on pyridine and pyrimidine scaffolds was synthesized through the reactions of enaminones 2 with nitriles and various ammonia derivatives. The structures of the newly synthesized compounds were confirmed using multiple spectroscopic techniques, including IR, ¹H-NMR, ¹³C-NMR, and MS, as well as elemental analysis. Evaluation of the antimicrobial activity of these heterocycles demonstrated notable potency, particularly among the pyrimidine analogues.

Research Authors
Ahmed Abdou O. Abeed
Research Date
Research Department
Research Journal
Arkivoc
Research Pages
202512523
Research Website
https://scholar.google.com.eg/scholar?oi=bibs&cluster=1777709404125944157&btnI=1&hl=en
Research Year
2025

Efficiency of mining rock wastes in the removal of toxic heavy metal ions (Pb²⁺, Cu²⁺, and Cd²⁺) from contaminated water solutions

Research Abstract

The Abu Tartur Plateau in the Western Desert of Egypt hosts the largest phosphate mining operation in the Middle East. Mining activities in this area generate several million tons annually of overburden waste materials, including carbonate, black shale, siltstone, glauconite, and sandstone. In the present study, phosphatic dolomite (PD) and black shale were collected from these mining wastes. Phosphatic dolomite, along with sodalite-based phosphatic dolomite (SBPD) synthesized from calcined phosphatic dolomite (CPD) and black shale, were evaluated as low-cost adsorbents for the removal of heavy metals (Pb²⁺, Cu²⁺, and Cd²⁺) from synthetic wastewater. Heavy metal contamination, particularly by Cd, Pb, and Cu, represents a major global environmental challenge. Among the available remediation techniques, adsorption is widely considered one of the most effective approaches due to its environmental sustainability, economic feasibility, and operational simplicity. The materials (PD, CPD, and SBPD) were characterized by using X-ray fluorescence (XRF), X-ray diffraction (XRD), Fourier Transform Infrared Spectroscopy (FTIR), Scanning Electron Microscopy (SEM) and BET surface
area. Key adsorption parameters—including adsorbent dosage, pH, initial metal concentration,
and contact time—were systematically investigated for Pb²⁺, Cu²⁺, and Cd²⁺ removal. The optimal
adsorption performance for SBPD was achieved using a dosage of 0.2 g for Pb²⁺ and Cd²⁺, whereas PD showed optimal removal efficiencies at 0.3 g for Pb²⁺ and 0.6 g for Cu²⁺. Both adsorbents exhibited a preferential removal order of Pb²⁺ > Cu²⁺ > Cd²⁺. Kinetic and isotherm models were applied to interpret the adsorption mechanisms. The results of the present study confirm that sodalite based phosphatic dolomite (SBPD) exhibited higher metal removal efficiency than unmodified phosphatic dolomite (PD).

Research Authors
Aya T. Fathy, Mohamed A. Moneim, Fatma M. Dardir, Abdalla M. El Ayyat & Ezzat A. Ahmed
Research Date
Research Department
Research Journal
Scientific Reports
Research Pages
19
Research Vol
16:17343
Research Website
https://www.nature.com/articles/s41598-026-48461-y
Research Year
2026

Elliptic anisotropy measurement of the f0(980) hadron in proton-lead collisions and evidence for its quark-antiquark composition

Research Authors
The CMS Collaboration
Research Date
Research Department
Research Journal
Nature communications
Research Pages
7990
Research Publisher
Nature Publishing Group UK
Research Vol
16
Research Website
https://www.nature.com/articles/s41467-025-56200-6
Research Year
2025

Search for charged lepton flavor violating Z and Z' boson decays in proton-proton collisions at √s = 13 TeV

Research Authors
CMS Collaboration
Research Date
Research Department
Research Journal
PHYSICAL REVIEW D
Research Pages
112011
Research Publisher
American Physical Society
Research Vol
112
Research Website
https://journals.aps.org/prd/abstract/10.1103/8lw4-6lyk
Research Year
2025
Subscribe to